Automation Scripts
E X P L A I N E D
I've written a set of scripts that work data through our analysis pipeline. Each dataset will have its own set of scripts because every dataset will have slightly different parameters and need adjusted scripts. These are here to serve as a guide. You can look at past scripts and their comments to see what they're doing. Tory will write scripts for future datasets - just let her know.
automation1.m
IMPORTS .RAW FILES, SELECTS THE CHANNEL LOCATION FILE, DELETES THE BAD CHANNELS, FILTERS THE DATA, RUNS ICA, DIVIDES DATASET INTO EPOCHS, REMOVES BASELINE, AND SAVES THE FILE.
Sasica
REMOVING NON-NEURAL COMPONENTS WITH SASCIA.
THERE IS NO SCRIPT FOR THIS ONE. USE THE MENUS.
automation3.m
automation4.m
CONVERTS DATA TO THE FIELDTRIP FORMAT, LOADS IT INTO FIELDTRIP, AND CALCULATES THE AVERAGE WAVEFORM FOR EACH EVENT TYPE FOR EACH PERSON
automation5.m
PLOTS AND SAVES HEADPLOTS FOR THE N170, EPN, AND LPP FOR EACH SUBJECT FOR EACH STIMULUS TYPE
automation6.m
PLOTS AND SAVES WAVEFORMS FOR THE N170, EPN, AND LPP FOR EACH SUBJECT FOR EACH STIMULUS TYPE
automation7.m
CALCULATES THE AVERAGE AMPLITUDE FOR A SET OF CHANNELS FOR A TIME WINDOW FOR THE N170, EPN, AND LPP FOR EACH SUBJECT FOR EACH STIMULUS TYPE